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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
THCA rs7816606 chr8:11205602 T/C SGK223 chr8:8175258-8244008:- -0.39 -7.44 4.56E-13 Box Plot
THCA rs7816636 chr8:11205654 T/A SGK223 chr8:8175258-8244008:- -0.37 -6.94 1.27E-11 Box Plot
THCA rs7817142 chr8:10157202 A/G SGK223 chr8:8175258-8244008:- 0.38 6.16 1.5E-9 Box Plot
THCA rs7817658 chr8:11206543 A/G SGK223 chr8:8175258-8244008:- -0.37 -7.06 5.73E-12 Box Plot
THCA rs7819216 chr8:10312927 C/G SGK223 chr8:8175258-8244008:- 0.37 5.92 6.12E-9 Box Plot
THCA rs7819225 chr8:3241474 C/G CSMD1 chr8:2792875-4852494:- -0.4 -7.16 3.06E-12 Box Plot
THCA rs7819395 chr8:11211068 T/C SGK223 chr8:8175258-8244008:- -0.37 -6.89 1.77E-11 Box Plot
THCA rs7819412 chr8:11045161 A/G SGK223 chr8:8175258-8244008:- -0.5 -9.72 1.72E-20 Box Plot
THCA rs7819673 chr8:3241798 C/T CSMD1 chr8:2792875-4852494:- -0.47 -8.13 3.72E-15 Box Plot
THCA rs7819794 chr8:3241879 C/G CSMD1 chr8:2792875-4852494:- -0.43 -7.76 5.1E-14 Box Plot
THCA rs7819929 chr8:3241969 C/T CSMD1 chr8:2792875-4852494:- -0.49 -9.53 8.06E-20 Box Plot
THCA rs7820301 chr8:11228672 G/A SGK223 chr8:8175258-8244008:- -0.38 -7.24 1.85E-12 Box Plot
THCA rs7820338 chr8:11793925 G/A SGK223 chr8:8175258-8244008:- -0.46 -8.54 1.81E-16 Box Plot
THCA rs7820563 chr8:3237179 G/C CSMD1 chr8:2792875-4852494:- -0.4 -6.27 8.1E-10 Box Plot
THCA rs7820860 chr8:10950396 C/G SGK223 chr8:8175258-8244008:- 0.48 9.15 1.6E-18 Box Plot